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High-Performance GPU Programming and Sonochemistry Research Group

Csanád Kalmár

PhD Student

Dr. Kálmán Klapcsik

Assistant Professor

Dr. Ferenc Hegedűs

Scientific Researcher

Introduction of the Research Group

High-performance computing is no longer a privilege of supercomputer users. The technology has infiltrated into our everyday lives, albeit unnoticed. A personal computer with a 64-core AMD EPYC processor and two Tesla A100 graphics cards (GPUs) would have been among the top 500 supercomputers of 2010. Since GPUs account for the largest share of the performance of most high-performance workstations, one of the main activities of our research group is the application of high-performance GPU programming in the simulation of dynamical systems. The heterogeneous CPU-GPU architecture and the massively parallel nature of GPUs provoke a number of difficulties. Our research team has found effective solutions to most of the difficulties, and currently our general-purpose ordinary differential equation solver is the fastest amongst the currently available and widespread packages (www.gpuode.com). We also work on custom solutions for specific problems that fit the GPU's hardware architecture to harness most of its performance. Another major topic of our research group is a special branch of chemistry called sonochemistry. Its physical basis is the appearance of bubble clouds during the irradiation of a liquid with high intensity and frequency ultrasound. During the pulsation of the individual micron-sized bubbles, the contraction can be so high that the internal temperature can reach thousands of degrees of Kelvin, which induces chemical reactions. We are currently working on modelling and simulating the chemical processes that take place in the bubbles and bubble clouds. Our long-term goal is to design optimal rector geometries and develop optimal operating strategies for the degradation of hazardous chemical species and the synthesis of various materials (e.g., nanoparticles, ammonia). Applying high performance GPU programming is essential here.

Watch our 3-minute introductory video:

Achievements

- Development of a GPU-optimized general-purpose ordinary differential equation solver called “Massively Parallel GPU-ODE Solver” (MPGOS). The program package is the fastest solution available (www.gpuode.com)
- Our group was the first to use high-performance GPU programming in sonochemistry for large-scale optimization (nearly two billion parameter combinations)
- Code Development specialized for GPU architecture for sonochemical applications (including simulation of chemical processes)

Publications

Nagy D., Plavecz, L., Hegedűs F. (2022) The art of solving a large number of non-stiff, low-dimensional ordinary differential equation systems on GPUs and CPUs. Communications in Nonlinear Science and Numerical Simulation, Volume 112, p. 106521. https://doi.org/10.1016/j.cnsns.2022.106521

Kalmár C., Turányi T., Zsély I. G., Papp M., Hegedűs F. (2022) The importance of chemical mechanisms in sonochemical modelling. Ultrasonics Sonochemistry, Volume 83, p. 105925. https://doi.org/10.1016/j.ultsonch.2022.105925

Hegedűs F. (2021) Program package MPGOS: challenges and solutions during the integration of a large number of independent ODE systems using GPUs. Communications in Nonlinear Science and Numerical Simulation, Volume 97, p. 105732. https://doi.org/10.1016/j.cnsns.2021.105732

Hegedűs F., Klapcsik K., Lauterborn W., Parlitz U., Mettin R. (2020) GPU accelerated study of a dual-frequency driven single bubble in a 6-dimensional parameter space: the active cavitation threshold. Ultrasonics Sonochemistry, Volume 67, p. 105067. https://doi.org/10.1016/j.ultsonch.2020.105067

Hegedűs F., Krähling P., Lauterborn W., Mettin R., Parlitz U. (2020) High-performance GPU computations in nonlinear dynamics: an efficient tool for new discoveries. Meccanica, Volume 55, pp. 2493-2504. https://doi.org/10.1007/s11012-020-01146-w

Awards

•2022, NVIDIA Academic Hardware Grants Program •2021, Bolyai+ Fellowship for Higher Education Young Teacher, Research, National Research, Development and Innovation Office, Hungary •2020, Bolyai+ Fellowship for Higher Education Young Teacher, Research, National Research, Development and Innovation Office, Hungary •2019, János Bolyai Research Scholarship, Hungarian Academy of Sciences, Hungary •2019, Bolyai Memorial Card, Hungarian Academy of Sciences, Hungary •2019, Humboldt Research Fellowship for Experienced Researchers, Alexander von Humboldt Foundation, Georg-August-Universität Göttingen, Third Institute of Physics, Germany •2018, KNORR-BREMSE, BME Scholarship Program, Knorr-Bremse Rail Systems Budapest ltd., Hungary •2017, KNORR-BREMSE, BME Scholarship Program, Knorr-Bremse Rail Systems Budapest ltd., Hungary •2016, Grants to Support the Initiation of International Collaboration, Deutsche Forschungsgemeinschaft, Georg-August-Universität Göttingen, Third Institute of Physics, Germany •2016, Acknowledgement of the Dean, Faculty of Mechanical Engineering, Hungary •2015, János Bolyai Research Scholarship, Hungarian Academy of Sciences, Hungary

Journals

Journals: Ultrasonics Sonochemistry; Communications in Nonlinear Science and Numerical Simulation; Nonlinear Dynamics; Chaos, Solitons & Fractals; Chaos: An Interdisciplinary Journal of Nonlinear Science

Infrastructure

The research team currently has two workstations. The first one has an Nvidia Titan Black card and is mainly used by students. The other workstation accommodates two Nvidia RTX A5000 24GB graphics cards (awarded under the NVIDIA Academic Hardware Grants Program) that are used in scientific projects and can be used to develop/test multi-GPU applications. For larger projects, the Komondor supercomputer is used.

Projects

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Industry relations

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Conferences

•Cavitation meets Data Science, Göttingen, Germany, June 10-11 2022, invited speaker
•Complex aspects of cavitation, Drübeck, Germany, 2019 November 12-14 2019, contributed talk
•Humboldt Network Meeting, Hamburg, Germany, November 8-9 2019, Humboldt research fellow, contributed talk
•GPU Day, Budapest, Hungary, July 11-12 2019, contributed talk
•Dynamics Days, Rostok, Germany, Szeptember 2-6 2019, contributed talk
•Fourth International Conference on Recent Advances in Nonlinear Mechanics, Lodz, Poland, May 7-10 2019, contributed talk
•Workshop on Cavitation Exploration, Ljubjana, Slovenia, September 27-28 2018, contributed talk
•GPU Day, Budapest, Hungary, Június 21-22 2018, contributed talk
•16th Meeting of the European Society of Sonochemistry, Besancon, France, April 15-19 2018, contributed talk
•DPG Spring Meetings, Berlin, Germany, March 11-16 2018, contributed talk
•GPU Day, Budapest, Hungary, Június 22-23 2017, contributed talk
•9th European Nonlinear Dynamics Conference, Budapest, Hungary, June 25-30 2017, contributed talk
•Dynamics Days, Szeged, Hungary, Június 5-9 2017, contributed talk

Other activities

•2013, Member of the Public body of the Hungarian Academy of Sciences •2020, Member of the Comette of the Géza Pattantyús-Ábrahám Doctoral School of Mechanical Engineering •2021-2023, Member of the Comette of the Hungarian Academy of Sciences